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Genomics

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Human Chromosome Launchpad Update Link / Bad Link? 
This site is provided as a single-source launchpad to information about each human chromosome. Each chromosome page provides links to gene maps, sequences, associated genetic disorders, nonhuman genetic models, identified genes, research efforts and laboratories, and other information as available.
Submitted Oct 27, 2000
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Biodatabase.com - White Paper Update Link / Bad Link? 
The Database Mining in the Human Genome Initiative white paper. This paper is presented in the spirit of Open Source software. This white paper will become a living document that will transcend its original boundaries with the addition of your updates, postings and comments.
Submitted Nov 10, 2000
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The Human Gene Mutation Database Update Link / Bad Link? 
The Human Gene Mutation Database (HGMD) at the Institute of Medical Genetics in Cardiff.
Submitted Oct 27, 2000
Updated Apr 30, 2008
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DNA from the Beginning Update Link / Bad Link? 
DNA from the Beginning is organized around key concepts. The science behind each concept is explained by: animation, image gallery, video interviews, problem, biographies, and links.
Submitted Sep 16, 2000
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DNA Structural Analysis Sequenced Genomes Update Link / Bad Link? 
This list contains complete genomes that are publicaly available from 44 different organisms. The list is sorted by taxanomic groups.
Submitted Dec 09, 2000
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Functional Genomics Update Link / Bad Link? 
The Functional Genomics Jump Station: The ultimate Web page for information and links on all aspects of Functional Genomics Research. Institutes and groups involved in functional genomics, companies involved in functional genomics, publications on functional genomics, analysis of protein sequences, analysis of DNA sequences.
Submitted Nov 24, 2000
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Genomic Solutions Inc. Update Link / Bad Link? 
Provides life science researchers with advanced microarray and proteomic systems and services that enhance productivity and improve the gene and protein analysis processes.
Submitted Dec 03, 2000
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HSSP Update Link / Bad Link? 
Database of homology-derived protein structures. Proteins, Structure, Function & Genetics.
Submitted Sep 20, 2000
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Human Genome Sequencing Update Link / Bad Link? 
This page allows users to browse the genome by chromasome and download sequences. A searchable tool bar allows quick access to each chromasome's database.
Submitted Sep 16, 2000
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KEGG Update Link / Bad Link? 
Kyoto Encyclopedia of Genes and Genomes (KEGG) is an effort to computerize current knowledge of molecular and cellular biology in terms of the information pathways that consist of interacting molecules or genes and to provide links from the gene catalogs produced by genome sequencing projects.
Submitted Sep 15, 2000
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Mouse Atlas and Gene Expression Update Link / Bad Link? 
The UK MRC Human Genetics Unit in Edinburgh is developing a digital atlas of mouse development and database to be a resource for spatially mapped data such as in situ gene expression and cell lineage. The project is in collaboration with the Department of Anatomy, University of Edinburgh.
Submitted Nov 25, 2000
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Phoretix Update Link / Bad Link? 
This site provides a wealth of information regarding our Phoretix image analysis software products for the detailed examination of 1D electrophoresis gels and blots, 2D electrophoresis gels and many types of macro- and microarray.
Submitted Dec 03, 2000
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Washington University Department of Genetics Update Link / Bad Link? 
Research interests in the Washington University Department of Genetics include the basic molecular and developmental genetics of model eukaryotic systems such as the fruit fly Drosophila melanogaster , the nematode worm Caenorhabditis elegans, the baker's yeast Saccharomyces cerevisiae, the zebrafish Danio rerio, and the house mouse Mus musculus , as well as the mapping and identification of genes responsible for important human hereditary diseases.
Submitted Oct 27, 2000
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Arabidopsis Genome Resource Update Link / Bad Link? 
AGR is a database developed at NASC using the ACEDB database system. Sequences, maps, and other information has been combined to form a large and powerful information resource.
Submitted Sep 27, 2000
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Ares lab Yeast Intron Database Update Link / Bad Link? 
This site contains information about the spliceosomal introns of the yeast Saccharomyces cerevisiae. This class of introns presents special problems for the annotation and analysis of eukaryotic genome sequences. Splice sites themselves are information-poor, and their recognition by the splicing apparatus is highly context-dependent. At present we do not understand splice site context well enough to predict which potential splice sites will be used, and thus how the genomic sequences will be expressed.
Submitted Dec 02, 2000
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BDGP Update Link / Bad Link? 
The Berkeley Drosophila Genome Project (BDGP) is a consortium of the Drosophila Genome Center, funded by the National Human Genome Research Institute, National Cancer Institute, and Howard Hughes Medical Institute, through its support of work in the Gerald Rubin and Allan Spradling laboratories. The goals of the Drosophila Genome Center are to finish the sequence of the euchromatic genome of Drosophila melanogaster to high quality and to generate and maintain biological annotations of this sequence.
Submitted Nov 05, 2000
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Berkeley Drosophila Genome Project Update Link / Bad Link? 
The goals of the Drosophila Genome Center are to finish the sequence of the euchromatic genome of Drosophila melanogaster to high quality and to generate and maintain biological annotations of this sequence. In addition to genomic sequencing, the BDGP is 1) producing gene disruptions using P element-mediated mutagenesis on a scale unprecedented in metazoans; 2) characterizing the sequence and expression of cDNAs; and 3) developing informatics tools that support the experimental process, identify features of DNA sequence, and allow us to present up-to-date information about the annotated sequence to the research community.
Submitted Sep 21, 2000
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BioBeat Online Magazine Update Link / Bad Link? 
Reporting on how Applied Biosystems products and technologies are helping life science researchers, pharmaceutical companies, and private enterprise unravel the mysteries of life, disease, and human identity encoded in our DNA.
Submitted Oct 29, 2000
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CEPH-Généthon Integrated Map Update Link / Bad Link? 
This is a part of the Fondation Jean Dausset - CEPH World-Wide-Web server containing CEPH-Généthon mapping data. These data were generated at CEPH and Généthon under direction of I. Chumakov, D. Cohen and J. Weissenbach. The Quickmap database and navigational tools were developed at CEPH by P. Rigault and E. Poullier. From this page, you can download or browse maps or text information.
Submitted Dec 03, 2000
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Chromatin Update Link / Bad Link? 
Nucleosome-dependent Gene Expression and Silencing in Yeast.
Submitted Sep 04, 2000
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Comprehensive Microbial Resource Update Link / Bad Link? 
These pages have been designed to allow the user to access data from all of the genome sequences completed to date. Accessible here is the Omniome database which contains the sequence and annotation of each of the completed genomes as well as associated information about the organisms (such as taxon and gram stain pattern), the structure and composition of their DNA molecules (such as plasmid vs. chromosome and GC content), and many attributes of the protein sequences predicted from the DNA sequence (such as pI and molecular weight).
Submitted Sep 16, 2000
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dbEST Update Link / Bad Link? 
dbEST is a division of GenBank that contains sequence data and other information on "single-pass" cDNA sequences, or Expressed Sequence Tags, from a number of organisms. A brief account of the history of human ESTs in GenBank is available.
Submitted Oct 24, 2000
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dbSTS Update Link / Bad Link? 
dbSTS is an NCBI resource that contains sequence and mapping data on short genomic landmark sequences or Sequence Tagged Sites.
Submitted Oct 24, 2000
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Dendrome Project Update Link / Bad Link? 
Dendrome is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is a project of the Institute of Forest Genetics, Pacific Southwest Research Station, USDA Forest Service.
Submitted Nov 17, 2000
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Euchromatin Network Update Link / Bad Link? 
The Euchromatin Network is designed to help researchers and others interested in the latest developments in our studies of this most active part of the genome within the cell nucleus.
Submitted Dec 02, 2000
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Fondation Jean Dausset Update Link / Bad Link? 
The Centre d'Etudes du Polymorphisme Humain (CEPH) is a research laboratory created in 1984 by Professor Jean Dausset (Nobel Prize, medicine and physiology, 1980). This laboratory constructs maps of the human genome.
Submitted Nov 26, 2000
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GDB Database Update Link / Bad Link? 
The data stored in GDB are divided among the biological information database (called HGD for Human Genome Database), the citation database, and the registry database. This modular approach presents a possible model for a federation of genomic databases and combined with the object broker, the model allows links to be established easily between and among participating databases.
Submitted Oct 24, 2000
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GeneCards Update Link / Bad Link? 
GeneCards is a database of human genes, their products and their involvement in diseases. It offers concise information about the functions of all human genes that have an approved symbol, as well as selected others.
Submitted Oct 17, 2000
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Genome Machine Update Link / Bad Link? 
This is a simple experiment in graphical user interfaces to genetic databases. You can perform one type of query of GDB at this time: "What genes have been mapped to a particular chromosome location?" i.e. cytogenetic band. The search is an "overla p" GDB search for known genes only (not anonymous segments, breakpoints, etc).
Submitted Oct 29, 2000
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Genome Programs Update Link / Bad Link? 
Site of links to online resources genomics - individual project sites, tools, a journal etc.
Submitted Nov 10, 2000
Updated Nov 16, 2000
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Genome-Related Meetings and Reports Update Link / Bad Link? 
This page features meetings and reports of meetings important for achieving and reporting progress of the Human Genome Project.
Submitted Dec 08, 2000
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GenomeNet Update Link / Bad Link? 
GenomeNet is a Japanese network of database and computational services for genome research and related research areas in molecular and cellular biology.
Submitted Sep 04, 2000
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GenomeNet Update Link / Bad Link? 
Japanese network of database and computational services for genomic and related research in molecular and cellular biology.
Submitted Oct 27, 2000
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Genomes Guide Update Link / Bad Link? 
Human Genome Project resources, including background information on the project, specific sequences for each human chromasome, and Genome Maps of other organisms.
Submitted Sep 16, 2000
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Genomics News Update Link / Bad Link? 
Genomics News Wire is an independent web publication covering the emerging genomics industry.
Submitted Oct 29, 2000
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genOway Update Link / Bad Link? 
genOway develops transgenic in vivo / in vitro models: DNA microinjections, Knock-out / Knock-in mice, embryonic stem cell differentiation, inducible / conditional systems.
Submitted Oct 29, 2000
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GOBASE Update Link / Bad Link? 
GOBASE is a taxonomically broad organelle genome database that organizes and integrates diverse data related to organelles. The current version focuses on the mitochondrial subset of data. In its second phase, GOBASE will also include information on chloroplasts and representative bacteria that are thought to be specifically related to the bacterial ancestors of mitochondria and chloroplasts.
Submitted Nov 16, 2000
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GOLD Update Link / Bad Link? 
Genomes Online Database, is a World Wide Web resource for comprehensive access to information regarding complete and ongoing genome projects around the world.
Submitted Dec 09, 2000
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Hum-Molgen Update Link / Bad Link? 
International communication forum in human genetics.
Submitted Oct 27, 2000
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Human Genome Project Information Update Link / Bad Link? 
The main homepage for Human Genome Project information --what the project is; its progress, history, and goals; what issues are associated with genome research; frequently asked questions, the science behind the project; who its sponsors are.
Submitted Oct 27, 2000
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Human Genome Project Information Update Link / Bad Link? 
The main homepage for Human Genome Project information --what the project is; its progress, history, and goals; what issues are associated with genome research; frequently asked questions, the science behind the project; who its sponsors are.
Submitted Oct 29, 2000
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HumGen Update Link / Bad Link? 
By entering this single door of HumGen you have access to a wide range of information and are connected to credible, relevant policy statements on topics related to human genetics around the world. The purpose of this web site is to connect visitors of this site to credible and readily accessible policy information on human genetics.
Submitted Oct 29, 2000
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InfoBioGen Update Link / Bad Link? 
This french site provides a computing and information resource to the French molecular biology and genome projects.
Submitted Nov 26, 2000
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Innovation Update Link / Bad Link? 
The Web companion piece to the PBS series presents the stories of doctors and patients as they confront medical challenges with the help of new developments in technology. The piece features original animations, stories and sidebars, as well as program information, a bulletin board, resources, and related stories in the news.
Submitted Oct 27, 2000
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Kyoto Encyclopedia of Genes and Genomes Update Link / Bad Link? 
Kyoto Encyclopedia of Genes and Genomes (KEGG) is an effort to computerize current knowledge of molecular and cellular biology in terms of the information pathways that consist of interacting molecules or genes and to provide links from the gene catalogs produced by genome sequencing projects.
Submitted Sep 27, 2000
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MaizeDB Update Link / Bad Link? 
MaizeDB provides a public Internet gateway to the current knowledge of the maize genome and its expression. The database is fully searchable using the search forms provided on this site. Query/Search forms can be reached through the links in the sidebar.
Submitted Dec 01, 2000
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Myriad Genetics, Inc. Update Link / Bad Link? 
Myriad Genetics, Inc., is a biotechnology company focused on human genomics. Myriad discovers genes for major human diseases and develops biochemical disease pathways for pharmaceutical and biotechnology companies worldwide. Myriad also develops therapeutics with its corporate collaborators and provides genetic testing services.
Submitted Oct 29, 2000
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NCI/DCS µArray Center mAdb Gateway Update Link / Bad Link? 
CIT/BIMAS is collaborating with NCI/DCS in the development of the BioInformatics to manage, access and analyze cDNA µArray data generated by the NCI/DCS µArray Center.
Submitted Sep 23, 2000
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OMIM Update Link / Bad Link? 
This database is a catalog of human genes and genetic disorders authored and edited by Dr. Victor A. McKusick and his colleagues at Johns Hopkins and elsewhere, and developed for the World Wide Web by NCBI, the National Center for Biotechnology Information. The database contains textual information, pictures, and reference information. It also contains copious links to NCBI's Entrez database of MEDLINE articles and sequence information.
Submitted Sep 04, 2000
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Primer on Molecular Genetics Update Link / Bad Link? 
A primer on the basic genetics and the science of the Human Genome Program. Also available in Acrobat (pdf) format.
Submitted Oct 27, 2000
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QUICKMAP Update Link / Bad Link? 
QUICKMAP is a compact database and navigation tool for the physical map of the human genome. The backbone of the map is the Genethon 1993 genetic map. This includes 2067 STS genetically mapped to a chromosomal assignation and a genetic position.
Submitted Nov 16, 2000
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Rosetta Inpharmatics, Inc. Update Link / Bad Link? 
Rosetta Inpharmatics’ integrated platform includes the design and analysis of proprietary DNA microarrays, a powerful, flexible informatics system, and advanced molecular biology techniques to support gene expression profiling programs. The Company produces DNA microarray gene expression information that provides comprehensive knowledge of a compound's target activities within any cell type (including human, animal, and plant cells). This permits researchers to explore the diverse causes and consequences of changes in gene expression, and focus on cellular processes specifically affected by genetic modification or exposure to pharmaceuticals or chemicals.
Submitted Sep 20, 2000
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TAIR Update Link / Bad Link? 
The Arabidopsis Information Resource (TAIR) provides genomic and literature data about Arabidopsis thaliana.
Submitted Oct 17, 2000
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The EMBL Nucleotide Sequence Database Update Link / Bad Link? 
The EMBL Nucleotide Sequence Database constitutes Europe's primary nucleotide sequence resource. Main sources for DNA and RNA sequences are direct submissions from individual researchers, genome sequencing projects and patent applications.
Submitted Sep 27, 2000
Updated Jan 05, 2001
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The Genome Database Update Link / Bad Link? 
The GDB Human Genome Data Base is a public repository of genetic and physical maps of the human genome. It contains information about genomic regions (genes and other landmarks), mapping reagents, maps, genetic polymorphism, literature references, and contact information.
Submitted Oct 08, 2000
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The SNP Consortium Update Link / Bad Link? 
The SNP Consortium Ltd. is a 501c3 non-profit foundation organized for the purpose of providing public genomic data. Its mission is to develop up to 300,000 SNPs distributed evenly throughout the human genome and to make the information related to these SNPs available to the public without intellectual property restrictions. The project started in April 1999 and is anticipated to continue until the end of 2001.
Submitted Dec 03, 2000
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The UK Human Genome Mapping Project Resource Centre Update Link / Bad Link? 
The UK Human Genome Mapping Project Resource Centre (HGMP-RC) provides access to leading-edge tools for research in the fields of genomics, genetics and functional genomics.
Submitted Sep 16, 2000
Updated Sep 27, 2000
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TIGR Human Gene Index Update Link / Bad Link? 
The TIGR Human Gene Index (HGI) integrates research results from international human gene research projects, including research at TIGR. The Index is an outgrowth of our Human cDNA Database (HCD) and Expressed Gene Anatomy Database (EGAD) projects. All data in the Index are freely available and do not require a user account for access.
Submitted Oct 27, 2000
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Valentis, Inc. Update Link / Bad Link? 
Valentis is the near-term beneficiary of genomics research, a massive effort underway to understand the sequence and function of the human genome. The first products coming from genomics research are biologic-based therapeutics such as proteins, antibodies and gene medicines. Valentis is developing delivery systems for these biologics to make them safer, more effective and more convenient for patients.
Submitted Oct 25, 2000
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