Genomics

Subcategories:

Human Chromosome Launchpad  
This site is provided as a single-source launchpad to information about each human chromosome. Each chromosome page provides links to gene maps, sequences, associated genetic disorders, nonhuman genetic models, identified genes, research efforts and laboratories, and other information as available.
Submitted: Oct 27, 2000
Biodatabase.com - White Paper  
The Database Mining in the Human Genome Initiative white paper. This paper is presented in the spirit of Open Source software. This white paper will become a living document that will transcend its original boundaries with the addition of your updates, postings and comments.
Submitted: Nov 10, 2000
The Human Gene Mutation Database  
The Human Gene Mutation Database (HGMD) at the Institute of Medical Genetics in Cardiff.
Submitted: Oct 27, 2000
DNA from the Beginning  
DNA from the Beginning is organized around key concepts. The science behind each concept is explained by: animation, image gallery, video interviews, problem, biographies, and links.
Submitted: Sep 16, 2000
DNA Structural Analysis Sequenced Genomes  
This list contains complete genomes that are publicaly available from 44 different organisms. The list is sorted by taxanomic groups.
Submitted: Dec 09, 2000
Genomic Solutions Inc.  
Provides life science researchers with advanced microarray and proteomic systems and services that enhance productivity and improve the gene and protein analysis processes.
Submitted: Dec 03, 2000
KEGG  
Kyoto Encyclopedia of Genes and Genomes (KEGG) is an effort to computerize current knowledge of molecular and cellular biology in terms of the information pathways that consist of interacting molecules or genes and to provide links from the gene catalogs produced by genome sequencing projects.
Submitted: Sep 15, 2000
Mouse Atlas and Gene Expression  
The UK MRC Human Genetics Unit in Edinburgh is developing a digital atlas of mouse development and database to be a resource for spatially mapped data such as in situ gene expression and cell lineage. The project is in collaboration with the Department of Anatomy, University of Edinburgh.
Submitted: Nov 25, 2000
Phoretix  
This site provides a wealth of information regarding our Phoretix image analysis software products for the detailed examination of 1D electrophoresis gels and blots, 2D electrophoresis gels and many types of macro- and microarray.
Submitted: Dec 03, 2000
Washington University Department of Genetics  
Research interests in the Washington University Department of Genetics include the basic molecular and developmental genetics of model eukaryotic systems such as the fruit fly Drosophila melanogaster , the nematode worm Caenorhabditis elegans, the baker's yeast Saccharomyces cerevisiae, the zebrafish Danio rerio, and the house mouse Mus musculus , as well as the mapping and identification of genes responsible for important human hereditary diseases.
Submitted: Oct 27, 2000
Arabidopsis Genome Resource  
AGR is a database developed at NASC using the ACEDB database system. Sequences, maps, and other information has been combined to form a large and powerful information resource.
Submitted: Sep 27, 2000
Ares lab Yeast Intron Database  
This site contains information about the spliceosomal introns of the yeast Saccharomyces cerevisiae. This class of introns presents special problems for the annotation and analysis of eukaryotic genome sequences. Splice sites themselves are information-poor, and their recognition by the splicing apparatus is highly context-dependent. At present we do not understand splice site context well enough to predict which potential splice sites will be used, and thus how the genomic sequences will be expressed.
Submitted: Dec 02, 2000
BDGP  
The Berkeley Drosophila Genome Project (BDGP) is a consortium of the Drosophila Genome Center, funded by the National Human Genome Research Institute, National Cancer Institute, and Howard Hughes Medical Institute, through its support of work in the Gerald Rubin and Allan Spradling laboratories. The goals of the Drosophila Genome Center are to finish the sequence of the euchromatic genome of Drosophila melanogaster to high quality and to generate and maintain biological annotations of this sequence.
Submitted: Nov 05, 2000
Berkeley Drosophila Genome Project  
The goals of the Drosophila Genome Center are to finish the sequence of the euchromatic genome of Drosophila melanogaster to high quality and to generate and maintain biological annotations of this sequence. In addition to genomic sequencing, the BDGP is 1) producing gene disruptions using P element-mediated mutagenesis on a scale unprecedented in metazoans; 2) characterizing the sequence and expression of cDNAs; and 3) developing informatics tools that support the experimental process, identify features of DNA sequence, and allow us to present up-to-date information about the annotated sequence to the research community.
Submitted: Sep 21, 2000
BioBeat Online Magazine  
Reporting on how Applied Biosystems products and technologies are helping life science researchers, pharmaceutical companies, and private enterprise unravel the mysteries of life, disease, and human identity encoded in our DNA.
Submitted: Oct 29, 2000
CEPH-Généthon Integrated Map  
This is a part of the Fondation Jean Dausset - CEPH World-Wide-Web server containing CEPH-Généthon mapping data. These data were generated at CEPH and Généthon under direction of I. Chumakov, D. Cohen and J. Weissenbach. The Quickmap database and navigational tools were developed at CEPH by P. Rigault and E. Poullier. From this page, you can download or browse maps or text information.
Submitted: Dec 03, 2000
Chromatin  
Nucleosome-dependent Gene Expression and Silencing in Yeast.
Submitted: Sep 04, 2000
Comprehensive Microbial Resource  
These pages have been designed to allow the user to access data from all of the genome sequences completed to date. Accessible here is the Omniome database which contains the sequence and annotation of each of the completed genomes as well as associated information about the organisms (such as taxon and gram stain pattern), the structure and composition of their DNA molecules (such as plasmid vs. chromosome and GC content), and many attributes of the protein sequences predicted from the DNA sequence (such as pI and molecular weight).
Submitted: Sep 16, 2000
dbEST  
dbEST is a division of GenBank that contains sequence data and other information on "single-pass" cDNA sequences, or Expressed Sequence Tags, from a number of organisms. A brief account of the history of human ESTs in GenBank is available.
Submitted: Oct 24, 2000
dbSTS  
dbSTS is an NCBI resource that contains sequence and mapping data on short genomic landmark sequences or Sequence Tagged Sites.
Submitted: Oct 24, 2000
Dendrome Project  
Dendrome is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is a project of the Institute of Forest Genetics, Pacific Southwest Research Station, USDA Forest Service.
Submitted: Nov 17, 2000
Euchromatin Network  
The Euchromatin Network is designed to help researchers and others interested in the latest developments in our studies of this most active part of the genome within the cell nucleus.
Submitted: Dec 02, 2000
Fondation Jean Dausset  
The Centre d'Etudes du Polymorphisme Humain (CEPH) is a research laboratory created in 1984 by Professor Jean Dausset (Nobel Prize, medicine and physiology, 1980). This laboratory constructs maps of the human genome.
Submitted: Nov 26, 2000
Genome Machine  
This is a simple experiment in graphical user interfaces to genetic databases. You can perform one type of query of GDB at this time: "What genes have been mapped to a particular chromosome location?" i.e. cytogenetic band. The search is an "overla p" GDB search for known genes only (not anonymous segments, breakpoints, etc).
Submitted: Oct 29, 2000
Genome Programs  
Site of links to online resources genomics - individual project sites, tools, a journal etc.
Submitted: Nov 10, 2000
Genome-Related Meetings and Reports  
This page features meetings and reports of meetings important for achieving and reporting progress of the Human Genome Project.
Submitted: Dec 08, 2000
GenomeNet  
GenomeNet is a Japanese network of database and computational services for genome research and related research areas in molecular and cellular biology.
Submitted: Sep 04, 2000
GenomeNet  
Japanese network of database and computational services for genomic and related research in molecular and cellular biology.
Submitted: Oct 27, 2000
Genomes Guide  
Human Genome Project resources, including background information on the project, specific sequences for each human chromasome, and Genome Maps of other organisms.
Submitted: Sep 16, 2000
genOway  
genOway develops transgenic in vivo / in vitro models: DNA microinjections, Knock-out / Knock-in mice, embryonic stem cell differentiation, inducible / conditional systems.
Submitted: Oct 29, 2000
GOBASE  
GOBASE is a taxonomically broad organelle genome database that organizes and integrates diverse data related to organelles. The current version focuses on the mitochondrial subset of data. In its second phase, GOBASE will also include information on chloroplasts and representative bacteria that are thought to be specifically related to the bacterial ancestors of mitochondria and chloroplasts.
Submitted: Nov 16, 2000
Hum-Molgen  
International communication forum in human genetics.
Submitted: Oct 27, 2000
Human Genome Project Information  
The main homepage for Human Genome Project information --what the project is; its progress, history, and goals; what issues are associated with genome research; frequently asked questions, the science behind the project; who its sponsors are.
Submitted: Oct 27, 2000
Human Genome Project Information  
The main homepage for Human Genome Project information --what the project is; its progress, history, and goals; what issues are associated with genome research; frequently asked questions, the science behind the project; who its sponsors are.
Submitted: Oct 29, 2000
HumGen  
By entering this single door of HumGen you have access to a wide range of information and are connected to credible, relevant policy statements on topics related to human genetics around the world. The purpose of this web site is to connect visitors of this site to credible and readily accessible policy information on human genetics.
Submitted: Oct 29, 2000
InfoBioGen  
This french site provides a computing and information resource to the French molecular biology and genome projects.
Submitted: Nov 26, 2000
Innovation  
The Web companion piece to the PBS series presents the stories of doctors and patients as they confront medical challenges with the help of new developments in technology. The piece features original animations, stories and sidebars, as well as program information, a bulletin board, resources, and related stories in the news.
Submitted: Oct 27, 2000
Kyoto Encyclopedia of Genes and Genomes  
Kyoto Encyclopedia of Genes and Genomes (KEGG) is an effort to computerize current knowledge of molecular and cellular biology in terms of the information pathways that consist of interacting molecules or genes and to provide links from the gene catalogs produced by genome sequencing projects.
Submitted: Sep 27, 2000
MaizeDB  
MaizeDB provides a public Internet gateway to the current knowledge of the maize genome and its expression. The database is fully searchable using the search forms provided on this site. Query/Search forms can be reached through the links in the sidebar.
Submitted: Dec 01, 2000
Myriad Genetics, Inc.  
Myriad Genetics, Inc., is a biotechnology company focused on human genomics. Myriad discovers genes for major human diseases and develops biochemical disease pathways for pharmaceutical and biotechnology companies worldwide. Myriad also develops therapeutics with its corporate collaborators and provides genetic testing services.
Submitted: Oct 29, 2000
NCI/DCS µArray Center mAdb Gateway  
CIT/BIMAS is collaborating with NCI/DCS in the development of the BioInformatics to manage, access and analyze cDNA µArray data generated by the NCI/DCS µArray Center.
Submitted: Sep 23, 2000
OMIM  
This database is a catalog of human genes and genetic disorders authored and edited by Dr. Victor A. McKusick and his colleagues at Johns Hopkins and elsewhere, and developed for the World Wide Web by NCBI, the National Center for Biotechnology Information. The database contains textual information, pictures, and reference information. It also contains copious links to NCBI's Entrez database of MEDLINE articles and sequence information.
Submitted: Sep 04, 2000
Primer on Molecular Genetics  
A primer on the basic genetics and the science of the Human Genome Program. Also available in Acrobat (pdf) format.
Submitted: Oct 27, 2000
QUICKMAP  
QUICKMAP is a compact database and navigation tool for the physical map of the human genome. The backbone of the map is the Genethon 1993 genetic map. This includes 2067 STS genetically mapped to a chromosomal assignation and a genetic position.
Submitted: Nov 16, 2000
Rosetta Inpharmatics, Inc.  
Rosetta Inpharmatics’ integrated platform includes the design and analysis of proprietary DNA microarrays, a powerful, flexible informatics system, and advanced molecular biology techniques to support gene expression profiling programs. The Company produces DNA microarray gene expression information that provides comprehensive knowledge of a compound's target activities within any cell type (including human, animal, and plant cells). This permits researchers to explore the diverse causes and consequences of changes in gene expression, and focus on cellular processes specifically affected by genetic modification or exposure to pharmaceuticals or chemicals.
Submitted: Sep 20, 2000
TAIR  
The Arabidopsis Information Resource (TAIR) provides genomic and literature data about Arabidopsis thaliana.
Submitted: Oct 17, 2000
The EMBL Nucleotide Sequence Database  
The EMBL Nucleotide Sequence Database constitutes Europe's primary nucleotide sequence resource. Main sources for DNA and RNA sequences are direct submissions from individual researchers, genome sequencing projects and patent applications.
Submitted: Sep 27, 2000
The SNP Consortium  
The SNP Consortium Ltd. is a 501c3 non-profit foundation organized for the purpose of providing public genomic data. Its mission is to develop up to 300,000 SNPs distributed evenly throughout the human genome and to make the information related to these SNPs available to the public without intellectual property restrictions. The project started in April 1999 and is anticipated to continue until the end of 2001.
Submitted: Dec 03, 2000
TIGR Human Gene Index  
The TIGR Human Gene Index (HGI) integrates research results from international human gene research projects, including research at TIGR. The Index is an outgrowth of our Human cDNA Database (HCD) and Expressed Gene Anatomy Database (EGAD) projects. All data in the Index are freely available and do not require a user account for access.
Submitted: Oct 27, 2000
Valentis, Inc.  
Valentis is the near-term beneficiary of genomics research, a massive effort underway to understand the sequence and function of the human genome. The first products coming from genomics research are biologic-based therapeutics such as proteins, antibodies and gene medicines. Valentis is developing delivery systems for these biologics to make them safer, more effective and more convenient for patients.
Submitted: Oct 25, 2000



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